Histologic Staining Techniques: Hematoxylin and Eosin Staining, Special Stains and Their Uses

In histology, staining techniques are essential for differentiating and identifying cellular components under a microscope. They enhance contrast in tissues, allowing for the detailed examination of cell morphology, structure, and function.


Hematoxylin and Eosin Staining


Hematoxylin and eosin (H&E) staining is a widely used technique in medical histology for analyzing tissue sections. Hematoxylin, a nuclear stain, has an affinity for basophilic substances, such as nucleic acids, and stains them purple-blue. Eosin, on the other hand, is eosinophilic and stains cytoplasmic components and extracellular fibers in varying shades of pink and red.


Steps involved in H&E staining:


  1. Tissue fixation
  2. Embedding in paraffin and sectioning
  3. Deparaffinization and hydration
  4. Hematoxylin staining
  5. Differentiation and bluing
  6. Eosin staining
  7. Dehydration, clearing, and mounting


Special Stains and Their Uses


Special stains are used when H&E does not provide enough contrast or specificity. For instance, Masson's trichrome stain is excellent for differentiating between collagen and muscle fibers, highlighted in blue or green, respectively. This method finds its use in studies of connective tissue and muscular pathology.


On the other hand, silver stain is utilized to visualize structures that are otherwise difficult to see, such as reticular fibers, nerve fibers, and fungi, which appear black against a yellow or light brown background. Toluidine blue, a metachromatic dye, can dye acidic tissue components, like mast cell granules, showing a shift in color from blue to purple. These special stains are crucial for identifying specific structures and diagnosing diseases based on microscopic tissue abnormalities.


Common applications of special stains:


  • Connective Tissue: Masson's trichrome stain
  • Neural Tissue: Silver stain
  • Mast Cells: Toluidine blue


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December 13, 2024
The MTM lab has experienced considerable growth over the last several years at the University of Illinois Chicago!
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2024 The MTM Lab has been awarded an NIDDK R01 (National Institute of Diabetes and Digestive and Kidney Diseases) grant to develop a novel microfluidic approach to elucidate the effects of soluble factor gradients, individually and in controlled combinations, on zonated functions in primary liver cells from rodents and humans towards determining species-specific effects . Ultimately, our novel devices can be used to investigate the mechanisms underlying liver zonation, chemical-induced zonated hepatotoxicity, and how zonation is perturbed in liver diseases, such as non-alcoholic fatty liver disease and hepatocellular carcinoma. The MTM Lab has been awarded a NIEHS (National Institute of Environmental Health Sciences) grant to develop a high throughput system to test placental cell invasion using a 3D placental microtissue coupled with hepatic liver biotransformation . This first-of-its-kind hepatic-placenta organ-tandem on a chip will simulate the liver metabolism that chemicals undergo in vivo prior to reaching the placental bed. This state-of-the-art in vitro platform will be the first step towards incorporating organism-level organization into reproductive risk assessment using a non-animal-based approach. The MTM Lab has been awarded a NIEHS (National Institute of Environmental Health Sciences) grant to develop a human gut-liver platform with microbiome interactions for in vitro toxicology . These first-of-its-kind scalable human gut-liver models will be developed for in vitro applications, such as compound screening and disease modeling, and be used to elucidate the effects of reciprocal tissue crosstalk on cell phenotype modulation. 2023 The MTM Lab has been awarded a NIDDK (National Institute of Diabetes and Digestive and Kidney Diseases) grant to analyze the synergistic effects of extracellular matrix composition and stiffness, multicellular interactions, and soluble triggers of NAFLD in cellular phenotypic alterations , which could aid the development of novel drug therapies for this disease. The MTM Lab has been awarded a NIAAA (National Institute on Alcohol Abuse and Alcoholism) grant to develop a first-of-its-kind organotypic mouse liver model and investigate the effects of alcohol on multiple liver cell types in this model with comparisons to an in vivo mouse model of ALD that recapitulates several key features of human ALD. This platform can aid in understanding the molecular mechanisms underlying alcohol-associated liver disease.
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